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19 Open 29 Closed
19 Open 29 Closed
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Issues list

Allow 'assoc' for PLINK2
#48 opened May 17, 2022 by richelbilderbeek
Use real dataset with 1000 SNPs and 1000 samples?
#46 opened May 10, 2022 by richelbilderbeek
assoc_qt gives an error when it needs to return an empty qassoc_table
#45 opened May 3, 2022 by richelbilderbeek
select_samples must ideally return the same data
#43 opened Apr 28, 2022 by richelbilderbeek
Add select_samples
#42 opened Apr 27, 2022 by richelbilderbeek
Let 'select_snps' work on 'assoc_qt_data'
#41 opened Apr 27, 2022 by richelbilderbeek
Add 'check_assoc_qt_data_has_correct_sizes'
#40 opened Apr 27, 2022 by richelbilderbeek
Add function 'create_bgen_files_for_saige'
#32 opened Oct 28, 2021 by richelbilderbeek
1
Can PLINK v1.7 handle large datasets?
#29 opened Oct 8, 2021 by richelbilderbeek
By default, all BED files are SNP-major mode
#27 opened Oct 1, 2021 by richelbilderbeek
2
Compare PLINKs speeds after file creations
#26 opened Oct 1, 2021 by richelbilderbeek
@richelbilderbeek
1
Allow use case AJRG
#24 opened Oct 1, 2021 by richelbilderbeek
4 tasks done
[upstream] Use pgenlibr to save .pgen files
#22 opened Sep 28, 2021 by richelbilderbeek
Call assoc_from_bfile from assoc when using PLINK binary data
#19 opened Sep 23, 2021 by richelbilderbeek
@richelbilderbeek
Do GWAS tutorial by Marees et al., 2018
#15 opened Sep 15, 2021 by richelbilderbeek
1
Add PLINK2 general usage
#14 opened Sep 10, 2021 by richelbilderbeek
Add PLINK1 tutorial
#13 opened Sep 10, 2021 by richelbilderbeek
Process/compare with another phenotype simulator from bigsnpr
#12 opened Jun 17, 2021 by richelbilderbeek
Process use case Daniel: use R code from within PLINK
#9 opened Jun 14, 2021 by richelbilderbeek
ProTip! Adding no:label will show everything without a label.