Skip to content
@Gaius-Augustus

Gaius-Augustus

Popular repositories Loading

  1. BRAKER BRAKER Public

    BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

    Perl 334 80

  2. Augustus Augustus Public

    Genome annotation with AUGUSTUS

    C++ 270 107

  3. GALBA GALBA Public

    GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from one or several close…

    Perl 113 3

  4. TSEBRA TSEBRA Public

    Forked from LarsGab/TSEBRA

    TSEBRA: Transcript Selector for BRAKER

    Python 40 6

  5. MakeHub MakeHub Public

    Fully automated generation of UCSC assembly hubs

    Python 32 4

  6. clamsa clamsa Public

    Forked from liemonade/clamsa

    ClaMSA (Classify Multiple Sequence Alignments).

    Python 9

Repositories

Showing 10 of 17 repositories
  • Augustus Public

    Genome annotation with AUGUSTUS

    Gaius-Augustus/Augustus’s past year of commit activity
    C++ 270 107 147 4 Updated Jul 1, 2024
  • GALBA Public

    GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from one or several closely related species are available.

    Gaius-Augustus/GALBA’s past year of commit activity
    Perl 113 3 6 0 Updated Jul 1, 2024
  • VARUS Public

    RNA-Seq sampling

    Gaius-Augustus/VARUS’s past year of commit activity
    C++ 8 2 4 0 Updated Jul 1, 2024
  • learnMSA Public

    Learning and Aligning Large Protein Families (MSA-HMM)

    Gaius-Augustus/learnMSA’s past year of commit activity
    Jupyter Notebook 7 MIT 2 1 0 Updated Jun 24, 2024
  • TSEBRA Public Forked from LarsGab/TSEBRA

    TSEBRA: Transcript Selector for BRAKER

    Gaius-Augustus/TSEBRA’s past year of commit activity
    Python 40 7 11 0 Updated May 23, 2024
  • BRAKER Public

    BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes

    Gaius-Augustus/BRAKER’s past year of commit activity
    Perl 334 80 114 (3 issues need help) 1 Updated May 13, 2024
  • clamsa Public Forked from liemonade/clamsa

    ClaMSA (Classify Multiple Sequence Alignments).

    Gaius-Augustus/clamsa’s past year of commit activity
    Python 9 2 4 (1 issue needs help) 0 Updated Apr 26, 2024
  • tf_tcmc Public Forked from liemonade/tf_tcmc

    Tensorflow Implementation for calculating graphical probabilistical models with edge transitions modelled by Time-reversible Continuous-time Markov Chains (TCMC).

    Gaius-Augustus/tf_tcmc’s past year of commit activity
    Python 2 1 1 0 Updated Mar 18, 2024
  • MakeHub Public

    Fully automated generation of UCSC assembly hubs

    Gaius-Augustus/MakeHub’s past year of commit activity
    Python 32 GPL-3.0 4 0 0 Updated Feb 17, 2024
  • webaugustus Public
    Gaius-Augustus/webaugustus’s past year of commit activity
    Groovy 0 0 0 0 Updated Dec 22, 2023
View all repositories

Top languages

Loading…

Most used topics

Loading…