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Simplify mhpl8r type #82

Merged
merged 5 commits into from
Apr 7, 2021
Merged

Simplify mhpl8r type #82

merged 5 commits into from
Apr 7, 2021

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standage
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@standage standage commented Apr 7, 2021

The thresholds used currently for genotype calling are not well thought out or tested. This PR disables them by default for now, though they can still be activated when needed (i.e. to make legacy tests still pass). Looking forward, it may make sense to delegate the thresholds to a dedicated program before e.g. analysis with probgen software.


  • Changes are clearly described above
  • Any relevant issue threads are referenced in the description
  • Any new features are tested (see docs/DEVEL.md for details)
  • Substantial changes are documented in CHANGELOG.md (see https://keepachangelog.com/en/1.0.0/)

@standage standage merged commit 249d857 into master Apr 7, 2021
@standage standage deleted the simplify-type branch April 7, 2021 18:22
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