Getting Started on AnVIL

This book was created from this github template.

You can see the rendered book here: https://jhudatascience.org/AnVIL_Book_Getting_Started/

If you would like to contribute to this book, take a look at the getting_started.md.

About this book

This book is part of a series of books for the NHGRI’s Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL). Here, we present opinionated step-by-step guides for setting up accounts focused on three personas: PIs, Analysts, and Consortia. Additional guides are provided to help you with Workspaces, launch interactive tools, and start working with data. Learn more about AnVIL by visiting https://anvilproject.org or reading the preprint.

Learning Objectives

This book will teach learners to:

• Set up accounts on AnVIL
• Use AnVIL Workspaces to run common genomics tools including Galaxy, RStudio, and Jupyter Notebooks
• Access data on AnVIL

Other books in this series

Please check out our full collection of AnVIL and related resources here.

Encountering problems?

If you are encountering any problems with this book, please file a GitHub issue or create a post on Discourse.

All materials in this book are licensed under a Creative Commons Attribution 4.0 International License unless noted otherwise.