R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series
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Updated
Jul 1, 2024 - R
R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series
R package to calculate the final size of an SIR epidemic in populations with heterogeneity in social contacts and disease susceptibility
A library of published compartmental epidemic models, and classes to represent demographic structure, non-pharmaceutical interventions, and vaccination regimes, to compose epidemic scenarios.
EpiSimulator: A Data-Driven Stochastic Hybrid Model for COVID-19 in Italy.
[No longer being developed. Use the epichains package instead]. Methods for simulating and analysing the sizes and lengths of chains from branching process models
Agent-based modelling of pandemics using the Susceptible, Infected, Recovered (SIR) framework.
[Under active development] Methods for simulating and analysing the sizes and lengths of infectious disease transmission chains from branching process models
Predicting COVID-19 pandemic by spatio-temporal graph neural networks https://arxiv.org/abs/2305.07731
[Computer Modeling] SIR/SIRS/SIRQ/ISIR/SEIR compartmental models for numerical epidemic modelling in MATLAB.
Collection of epidemic models. Includes ODEs, stochastic and complex networks, with non-markovian distributions (Erlang type).
A Basic Compartmental Epidemic Modelling API
DeepAR implementation for seasonal influenza cases in German districts
*Stochastic Modelling of Vector-Borne Diseases with Household Structures* Thesis submitted for the degree of Honours of Mathematical Sciences in Applied Mathematics at The University of Adelaide.
Worker of prediksicovidjatim
The map of prediksicovidjatim, built with Arcgis Wep Appbuilder Developer Edition.
A HTML/JavaScript simulator for an epidemc on a population
Epidemic Models. Bayesian Estimation (MCMC) of Change-Points in COVID-19 Reported Cases in 3 European Countries
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